Malaysia MyInvois E-Invoicing: Software for the 2026 Mandate
LHDN's MyInvois e-invoicing is phased in by turnover, with the RM1m-5m band live from January 2026. Here's how MyInvois works, who's exempt, and which accounting software (AutoCount, Bukku, HashMicro, Deskera) submits to it.
Malaysia's e-invoicing runs through **LHDN's MyInvois** system, rolled out in phases by annual turnover: RM100m+ since Aug 2024, RM25m-100m since Jan 2025, RM5m-25m since Jul 2025, and **RM1m-5m from 1 January 2026**. In December 2025 the Cabinet raised the permanent exemption to **RM1,000,000 turnover** and scrapped the planned RM150k-500k phase, so the smallest businesses are exempt for now. Above the threshold, every invoice must be validated by MyInvois (up to 55 required fields, digitally signed with an LHDN certificate), and from 2026 individual e-invoices are required for transactions over RM10,000. You can submit free through the **MyInvois portal** (fine for low volume) or through accounting software with built-in submission — **AutoCount** is one named example — while larger firms use direct API or Peppol. Confirm your vendor's current MyInvois support before committing.
| Option | Type | How it handles MyInvois | Best for |
|---|---|---|---|
| MyInvois Portal | Government portal (free) | Manual entry or upload; LHDN validates and returns the certified e-invoice | Low-volume businesses just over the RM1m threshold |
| AutoCount | Accounting software (MY) | Built-in MyInvois submission from within the accounting system | Malaysian SMEs already running AutoCount |
| Bukku | Cloud accounting (MY) | Malaysian cloud accounting; confirm current MyInvois integration | Small Malaysian businesses wanting cloud books |
| HashMicro | ERP | ERP with e-invoicing; suited to API / higher volume | Larger firms needing ERP-grade integration |
| Deskera | Business suite | All-in-one books and inventory; verify MyInvois submission | SMEs wanting one suite across functions |
| Direct API / Peppol | Integration route | Connect a custom ERP straight to MyInvois | High-volume or bespoke ERP setups |
The Tools in Detail
AutoCount
Finance · Paid · Malaysia, Singapore, Philippines · EN / MS / ZH
AutoCount is a Petaling Jaya-headquartered accounting and ERP suite that owns the Malaysian SME accounting market with 240,000+ companies on AutoCount Accounting. Strong on Malaysian SST and the new e-Invoice mandates, multi-branch retail, and inventory for trading and distribution businesses.
AutoCount owns the Malaysian SME accounting market in 2026, particularly among Chinese-Malaysian trading and distribution businesses. Pricing is roughly MYR 1,880 to MYR 4,800 per year for the cloud edition depending on user count, and one-time license fees for the desktop edition. The LHDN MyInvois e-Invoice handling shipped on schedule for the 2026 mandate, ahead of most international vendors. Xero is cleaner UX but weaker on Malaysian SST and e-Invoice; FlowAccount handles Thailand. For Malaysian-only Sdn Bhd accounting, AutoCount is the safe default that the local accountant ecosystem already knows how to work with.
Best for: Malaysian Sdn Bhd companies needing LHDN e-Invoice compliance; Penang and KL trading and distribution businesses with multi-warehouse stock; Malaysian retail chains running 5-30 outlets with consolidated accounting; SME accountants and audit firms preparing client books in MYR
Bukku
Finance · From MYR 59/month · Free tier · Malaysia, Singapore · EN / MS / ZH
Bukku is a Selangor-headquartered cloud accounting platform designed for Malaysian SMEs and e-commerce sellers. It simplifies bookkeeping, invoicing, and inventory management with a focus on Malaysian SST compliance and automated bank feeds from major Malaysian banks. Known for its clean interface and affordable pricing for micro-SMEs.
Bukku is the modern Malaysian alternative to Xero or AutoCount, specifically tuned for local business workflows and SST requirements. Pricing is roughly MYR 59/month, making it significantly more accessible for Malaysian micro-SMEs than global alternatives. Its 2026 update added deep e-invoice integration for the Malaysian LHDN mandate, positioning it as a top choice for digital-first Sdn Bhds.
Best for: Malaysian micro-SMEs and startups; E-commerce sellers on Shopee and Lazada; Service-based businesses in Malaysia and Singapore; Accountants managing multiple small client books
HashMicro
ERP · Paid · SEA, Singapore, Indonesia, Malaysia, Philippines · EN / ID / MS
HashMicro is a Singapore-headquartered ERP suite popular with Indonesian, Malaysian, and Filipino manufacturing, distribution, and trading companies. It bundles accounting, inventory, manufacturing, CRM, HR, and procurement into one product, often as a cheaper SEA alternative to SAP Business One and Oracle NetSuite for businesses between 50 and 500 staff.
HashMicro is the Singapore-based ERP that found product-market fit specifically with Indonesian manufacturing and distribution SMEs. Pricing typically lands at SGD 3,000 to SGD 15,000 per month depending on user count and modules, which is one-third to one-quarter of SAP Business One or NetSuite for the same workload. The Indonesian compliance modules (e-Faktur output, PPN handling, PSAK formatting) are tighter than global vendors. Deskera is the right pick for service-business SMEs and lighter workflows; HashMicro is the right pick for SEA companies with manufacturing or multi-warehouse operations that need ERP depth.
Best for: Indonesian PT manufacturing companies with multi-plant operations; Malaysian distribution and trading SMEs needing inventory depth; Filipino retail chains running 10+ outlets needing consolidated reporting; SEA exporters managing import/export documentation in one system
Deskera
Business Management · From USD 29/month · Free tier · Global, SEA, Singapore, Malaysia, Indonesia, Philippines · EN / ZH / ID / MS
Deskera is a Singapore-headquartered cloud-based business software suite designed for small and medium-sized enterprises (SMEs). It offers integrated modules for accounting (ERP), customer relationship management (CRM), and human resources (HR), providing a unified platform to manage various business operations.
Deskera is particularly relevant in Singapore due to its compliance with local regulations and its status as a pre-approved vendor for government productivity grants (like the PSG). It offers localized features for GST/SST compliance and local payroll requirements in several SEA countries, making it a preferred choice for regional SMEs.
Best for: SMEs looking for an integrated business management suite; Startups needing scalable ERP and CRM solutions; Businesses in Singapore and the broader SEA region; Companies transitioning from manual to automated workflows
SEA Operational Reasoning
The turnover phasing is the part that trips businesses up, because the goalposts moved late in 2025. As of 2026 the mandate reaches the RM1m-5m band, but the December 2025 decision to set a permanent RM1,000,000 exemption (and cancel the planned RM150k-500k phase) means the smallest businesses are out of scope for now — so the first question is simply whether your turnover crosses RM1m. If it does, the second decision is portal vs software. The MyInvois portal is free and workable for low volume, but it is manual; accounting software with built-in submission removes the re-keying and handles the 55-field, digitally-signed format for you, and API/Peppol suits high volume or custom ERP. Among tools in our directory, AutoCount is the clearest fit because it is a Malaysian accounting product with native MyInvois submission; Bukku, HashMicro and Deskera cover cloud-accounting, ERP and business-suite needs respectively, but you should confirm each one's current MyInvois status on the vendor site, since integrations are still maturing across the Phase 4 rollout.
Related Expert Guides
The questions operators actually ask.
Who has to use MyInvois in 2026?
The mandate is phased by annual turnover. Bands above RM5m have been live since 2024-2025, and the RM1m-5m band came into scope on 1 January 2026. In December 2025 the Cabinet set a permanent exemption at RM1,000,000 turnover and cancelled the planned smaller phase, so businesses below RM1m turnover are currently exempt. Confirm your position on the LHDN (hasil.gov.my) timeline.
Do I need to buy software, or can I use the free MyInvois portal?
The MyInvois portal is free and suitable for low-volume businesses, but entry is manual. Accounting software with built-in MyInvois submission (AutoCount is one named example) or direct API / Peppol integration is aimed at higher volumes, removing manual re-keying. Which you need depends on invoice volume, not just turnover.
What makes a MyInvois e-invoice valid?
It must be submitted to MyInvois in real time, contain up to 55 required data fields, and be digitally signed with an LHDN-issued certificate; MyInvois then validates it and returns the certified invoice. From 2026, transactions above RM10,000 require individual e-invoices rather than consolidated ones.